Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium channel family protein | AJAP_RS04535 | Not Available | - | 901940 - 902686 | 27278.4 |
| pyridoxamine 5'-phosphate oxidase family protein | AJAP_RS04540 | Not Available | - | 902725 - 903174 | 16564.4 |
| prevent-host-death protein | AJAP_RS04545 | Not Available | + | 903339 - 903755 | 15283.8 |
| hypothetical protein | AJAP_RS04550 | Not Available | + | 903752 - 904177 | 16138.2 |
| paqr family membrane homeostasis protein trha | AJAP_RS04555 | Not Available | - | 904185 - 904871 | 24722.4 |
| isoprenyl transferase | AJAP_RS04560 | Not Available | + | 904958 - 905734 | 29154.7 |
| hypothetical protein | AJAP_RS04565 | Not Available | - | 905795 - 906043 | 8078.57 |
| phoh family protein | AJAP_RS04570 | Not Available | + | 906774 - 908060 | 46447.8 |
| guab1 family imp dehydrogenase-related protein | AJAP_RS04575 | Not Available | - | 908113 - 909552 | 49991.5 |
| duf309 domain-containing protein | AJAP_RS04580 | Not Available | + | 909588 - 910058 | 17071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.