Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AJAP_RS04135 | Not Available | + | 820053 - 820622 | 20854.1 |
| tetratricopeptide repeat protein | AJAP_RS04140 | Not Available | - | 820651 - 821064 | 15445.5 |
| voc family protein | AJAP_RS04145 | Not Available | + | 821136 - 821624 | 17637.2 |
| phosphopyruvate hydratase | AJAP_RS04150 | Not Available | + | 821785 - 823071 | 45496.5 |
| septum formation initiator family protein | AJAP_RS04155 | Not Available | + | 823264 - 823626 | 13252.7 |
| duf501 domain-containing protein | AJAP_RS04160 | Not Available | + | 823651 - 824160 | 18071.4 |
| lytic transglycosylase domain-containing protein | AJAP_RS04165 | Not Available | + | 824345 - 825499 | 38885.4 |
| ppx/gppa phosphatase family protein | AJAP_RS04170 | Not Available | + | 825523 - 826476 | 33622.8 |
| abc transporter substrate-binding protein | AJAP_RS04175 | Not Available | + | 826733 - 828352 | 58511.0 |
| abc transporter permease | AJAP_RS04180 | Not Available | + | 828440 - 829366 | 33028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.