Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | AJAP_RS04085 | Not Available | + | 810802 - 811617 | 28337.1 |
| abc transporter atp-binding protein | AJAP_RS04090 | Not Available | + | 811635 - 812438 | 28860.9 |
| hypothetical protein | AJAP_RS04095 | Not Available | + | 812435 - 813808 | 48664.5 |
| hypothetical protein | AJAP_RS04100 | Not Available | + | 813817 - 814377 | 19560.1 |
| ppox class f420-dependent oxidoreductase | AJAP_RS04105 | Not Available | - | 814445 - 814855 | 14773.4 |
| iron uptake transporter deferrochelatase/peroxidase subunit | AJAP_RS04110 | Not Available | - | 814889 - 816154 | 44662.7 |
| iron uptake system protein efeo | AJAP_RS04115 | Not Available | - | 816151 - 817281 | 39842.8 |
| iron uptake transporter permease efeu | AJAP_RS04120 | Not Available | - | 817287 - 818126 | 29749.8 |
| murein transglycosylase | AJAP_RS04125 | Not Available | + | 818401 - 819105 | 24735.2 |
| nad(p)/fad-dependent oxidoreductase | AJAP_RS04130 | Not Available | - | 819078 - 819998 | 32843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.