Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | AJAP_RS04035 | Not Available | + | 800300 - 800902 | 21436.0 |
| deda family protein | AJAP_RS04040 | Not Available | + | 800874 - 801380 | 17925.5 |
| helix-turn-helix transcriptional regulator | AJAP_RS04045 | Not Available | - | 801370 - 802134 | 27785.7 |
| llm class flavin-dependent oxidoreductase | AJAP_RS04050 | Not Available | + | 802220 - 803134 | 33491.0 |
| transcription-repair coupling factor | AJAP_RS04055 | Not Available | + | 803191 - 806745 | 127833.0 |
| hypothetical protein | AJAP_RS04060 | Not Available | + | 806893 - 807897 | 35796.9 |
| mazg family protein | AJAP_RS04065 | Not Available | + | 807894 - 808814 | 32651.8 |
| nadp-dependent oxidoreductase | AJAP_RS04070 | Not Available | - | 808811 - 809725 | 31808.9 |
| winged helix-turn-helix transcriptional regulator | AJAP_RS04075 | Not Available | + | 809792 - 810208 | 15843.1 |
| rna polymerase sigma factor | AJAP_RS04080 | Not Available | + | 810263 - 810805 | 19689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.