Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | AJAP_RS41610 | Not Available | - | 8934659 - 8935645 | 34555.2 |
| class i sam-dependent methyltransferase | AJAP_RS41615 | Not Available | - | 8935665 - 8936516 | 31020.6 |
| sensor histidine kinase | AJAP_RS41620 | Not Available | - | 8936533 - 8937840 | 46032.3 |
| cca trna nucleotidyltransferase | AJAP_RS41625 | Not Available | - | 8937920 - 8939338 | 52535.0 |
| nudix hydrolase | AJAP_RS41630 | Not Available | + | 8939486 - 8940010 | 19440.9 |
| duf6049 family protein | AJAP_RS41635 | Not Available | + | 8940007 - 8942148 | 73617.2 |
| murein biosynthesis integral membrane protein murj | AJAP_RS41640 | Not Available | + | 8942562 - 8944511 | 69446.4 |
| protein kinase family protein | AJAP_RS41645 | Not Available | + | 8944632 - 8946191 | 54271.3 |
| rna polymerase sigma factor sigm | AJAP_RS41650 | Not Available | + | 8946223 - 8946882 | 23866.2 |
| hypothetical protein | AJAP_RS41655 | Not Available | + | 8946879 - 8947667 | 26688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.