Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | AJAP_RS41060 | Not Available | + | 8809125 - 8810339 | 44146.6 |
| hypothetical protein | AJAP_RS41065 | Not Available | + | 8810652 - 8811278 | 22377.4 |
| monocarboxylate uptake permease mctp | AJAP_RS41070 | Not Available | - | 8811275 - 8812918 | 59089.2 |
| duf3311 domain-containing protein | AJAP_RS41075 | Not Available | - | 8812915 - 8813193 | 10506.9 |
| alpha/beta hydrolase | AJAP_RS41080 | Not Available | + | 8813398 - 8815014 | 58069.7 |
| helix-turn-helix domain-containing protein | AJAP_RS41085 | Not Available | + | 8815149 - 8815424 | 9653.48 |
| endou domain-containing protein | AJAP_RS41090 | Not Available | - | 8815666 - 8816241 | 20729.4 |
| duf6297 family protein | AJAP_RS41095 | Not Available | - | 8816318 - 8817565 | 43849.9 |
| abc transporter atp-binding protein | AJAP_RS41100 | Not Available | - | 8817559 - 8818164 | 21614.8 |
| llm class f420-dependent oxidoreductase | AJAP_RS41105 | Not Available | - | 8818161 - 8819033 | 31621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.