Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS40235 | Not Available | - | 8641034 - 8641345 | 11046.0 |
| esx secretion-associated protein espg | AJAP_RS40240 | Not Available | - | 8641493 - 8642263 | 27712.7 |
| ppe domain-containing protein | AJAP_RS40245 | Not Available | - | 8642268 - 8643917 | 55170.8 |
| duf3558 domain-containing protein | AJAP_RS40250 | Not Available | - | 8643928 - 8644569 | 22613.1 |
| pe domain-containing protein | AJAP_RS40255 | Not Available | - | 8644520 - 8644906 | 13657.1 |
| phosphoribosylamine--glycine ligase | AJAP_RS40260 | Not Available | - | 8645043 - 8646305 | 42942.4 |
| glycerophosphodiester phosphodiesterase | AJAP_RS40265 | Not Available | + | 8646482 - 8647600 | 40599.3 |
| amino acid permease | AJAP_RS40270 | Not Available | + | 8647826 - 8649364 | 55054.3 |
| mfs transporter | AJAP_RS40275 | Not Available | - | 8649348 - 8650571 | 41965.5 |
| llm class f420-dependent oxidoreductase | AJAP_RS40280 | Not Available | - | 8650711 - 8651646 | 32663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.