Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallopeptidase | AJAP_RS39740 | Not Available | + | 8548359 - 8549588 | 42928.2 |
| heme-degrading domain-containing protein | AJAP_RS39745 | Not Available | + | 8549622 - 8550092 | 16667.5 |
| dihydrodipicolinate synthase family protein | AJAP_RS39750 | Not Available | + | 8550239 - 8551156 | 32149.2 |
| fatty acid desaturase family protein | AJAP_RS39755 | Not Available | + | 8551592 - 8552617 | 38054.3 |
| rgcvc family protein | AJAP_RS39760 | Not Available | + | 8552614 - 8552793 | 6112.04 |
| duf6307 family protein | AJAP_RS44480 | Not Available | + | 8552803 - 8552961 | 5847.98 |
| diaminopimelate decarboxylase | AJAP_RS39765 | Not Available | + | 8553103 - 8554446 | 47654.3 |
| lrp/asnc family transcriptional regulator | AJAP_RS39770 | Not Available | + | 8554615 - 8555109 | 17854.5 |
| rna polymerase recycling motor atpase helr | AJAP_RS39775 | Not Available | - | 8555190 - 8557394 | 80798.5 |
| lamg-like jellyroll fold domain-containing protein | AJAP_RS39780 | Not Available | - | 8557575 - 8559386 | 66174.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.