Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein cheb | AJAP_RS39400 | Not Available | - | 8479071 - 8479664 | 20177.6 |
| hypothetical protein | AJAP_RS39405 | Not Available | - | 8479688 - 8480053 | 13105.2 |
| 2-isopropylmalate synthase | AJAP_RS39410 | Not Available | + | 8480298 - 8482055 | 65467.1 |
| peroxiredoxin-like family protein | AJAP_RS39415 | Not Available | - | 8482120 - 8482746 | 22209.5 |
| tetr/acrr family transcriptional regulator | AJAP_RS39420 | Not Available | + | 8482805 - 8483410 | 21982.4 |
| lysr family transcriptional regulator | AJAP_RS39425 | Not Available | - | 8483367 - 8484305 | 33701.6 |
| eama family transporter | AJAP_RS39430 | Not Available | + | 8484393 - 8485316 | 32279.4 |
| 23s ribosomal rna methyltransferase erm | AJAP_RS39435 | Not Available | - | 8485219 - 8485953 | 27380.3 |
| sdr family oxidoreductase | AJAP_RS39440 | Not Available | - | 8486137 - 8486835 | 24302.8 |
| cgnr zinc finger domain-containing protein | AJAP_RS39445 | Not Available | + | 8486922 - 8487509 | 21399.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.