Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arsa family atpase | AJAP_RS39250 | Not Available | + | 8446667 - 8447797 | 40632.9 |
| whib family transcriptional regulator | AJAP_RS39255 | Not Available | - | 8447862 - 8448179 | 11828.9 |
| transglycosylase domain-containing protein | AJAP_RS39260 | Not Available | + | 8448530 - 8450704 | 75985.4 |
| metallophosphoesterase | AJAP_RS39265 | Not Available | + | 8450975 - 8451916 | 34305.1 |
| Trna-pro | Not Available | Not Available | + | 8451945 - 8452018 | Not Available |
| methyltransferase domain-containing protein | AJAP_RS39275 | Not Available | - | 8452936 - 8453616 | 24216.6 |
| prolyl oligopeptidase family serine peptidase | AJAP_RS39280 | Not Available | + | 8453656 - 8455500 | 66485.8 |
| 2-hydroxymuconate tautomerase | AJAP_RS39285 | Not Available | - | 8455514 - 8455741 | 8293.95 |
| tigr03085 family metal-binding protein | AJAP_RS39290 | Not Available | - | 8455875 - 8456501 | 22873.1 |
| glutamate decarboxylase | AJAP_RS39295 | Not Available | - | 8456562 - 8457935 | 50766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.