Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein ssd | AJAP_RS39005 | Not Available | - | 8398776 - 8399849 | 36857.4 |
| had family hydrolase | AJAP_RS39010 | Not Available | + | 8400431 - 8401228 | 28758.2 |
| glycoside hydrolase family 3 protein | AJAP_RS39015 | Not Available | + | 8401804 - 8403609 | 63498.0 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | AJAP_RS39020 | Not Available | + | 8403606 - 8404874 | 45294.3 |
| serine hydrolase | AJAP_RS39025 | Not Available | + | 8404886 - 8406661 | 62658.4 |
| murr/rpir family transcriptional regulator | AJAP_RS39030 | Not Available | + | 8406872 - 8407870 | 34807.3 |
| n-acetylmuramic acid 6-phosphate etherase | AJAP_RS39035 | Not Available | + | 8407888 - 8408817 | 32129.5 |
| ydcf family protein | AJAP_RS39040 | Not Available | + | 8408874 - 8409913 | 35132.8 |
| mfs transporter | AJAP_RS39045 | Not Available | - | 8410001 - 8411170 | 39293.0 |
| arsr/smtb family transcription factor | AJAP_RS39050 | Not Available | + | 8411223 - 8411528 | 11273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.