Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS38955 | Not Available | - | 8388649 - 8389188 | 18342.8 |
| sodium-translocating pyrophosphatase | AJAP_RS38960 | Not Available | - | 8389305 - 8391599 | 77571.8 |
| dead/deah box helicase | AJAP_RS38965 | Not Available | + | 8391919 - 8394384 | 86287.0 |
| bifunctional dna primase/polymerase | AJAP_RS38970 | Not Available | - | 8394413 - 8395039 | 22781.9 |
| rv3654c family tade-like protein | AJAP_RS38975 | Not Available | - | 8395457 - 8395813 | 12193.5 |
| tade family type iv pilus minor pilin | AJAP_RS38980 | Not Available | - | 8395810 - 8396148 | 11338.6 |
| duf4244 domain-containing protein | AJAP_RS43395 | Not Available | - | 8396148 - 8396321 | 5948.28 |
| type ii secretion system f family protein | AJAP_RS38990 | Not Available | - | 8396337 - 8396840 | 17153.0 |
| type ii secretion system f family protein | AJAP_RS38995 | Not Available | - | 8396900 - 8397640 | 25942.8 |
| tada family conjugal transfer-associated atpase | AJAP_RS39000 | Not Available | - | 8397637 - 8398779 | 40058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.