Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | AJAP_RS42660 | Not Available | - | 8346305 - 8346577 | 10284.9 |
| atp-dependent zinc metalloprotease ftsh | AJAP_RS38760 | Not Available | - | 8346546 - 8348963 | 86963.4 |
| esx secretion-associated protein espg | AJAP_RS38765 | Not Available | - | 8349153 - 8349986 | 30510.2 |
| esx secretion-associated protein espg | AJAP_RS38770 | Not Available | - | 8350173 - 8350967 | 28691.9 |
| wxg100 family type vii secretion target | AJAP_RS38775 | Not Available | - | 8351032 - 8352408 | 45103.4 |
| hypothetical protein | AJAP_RS38780 | Not Available | - | 8352426 - 8352791 | 12398.3 |
| hypoxanthine phosphoribosyltransferase | AJAP_RS38785 | Not Available | - | 8352936 - 8353499 | 20212.2 |
| trna lysidine(34) synthetase tils | AJAP_RS38790 | Not Available | - | 8353513 - 8354487 | 34062.6 |
| zinc-dependent metalloprotease | AJAP_RS38795 | Not Available | - | 8354484 - 8355512 | 36286.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | AJAP_RS38800 | Not Available | - | 8355613 - 8357670 | 71047.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.