Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | AJAP_RS38705 | Not Available | - | 8336455 - 8337363 | 32530.1 |
| rossmann-like and duf2520 domain-containing protein | AJAP_RS38710 | Not Available | - | 8337360 - 8338277 | 31284.7 |
| prsw family intramembrane metalloprotease | AJAP_RS38715 | Not Available | - | 8338413 - 8339582 | 41404.3 |
| duf6779 domain-containing protein | AJAP_RS38720 | Not Available | - | 8339611 - 8341623 | 72982.8 |
| duf3180 domain-containing protein | AJAP_RS38725 | Not Available | - | 8341693 - 8342154 | 16175.1 |
| merr family transcriptional regulator | AJAP_RS38730 | Not Available | + | 8342215 - 8343156 | 35562.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | AJAP_RS38735 | Not Available | - | 8343315 - 8343803 | 17667.9 |
| dihydroneopterin aldolase | AJAP_RS38740 | Not Available | - | 8343800 - 8344159 | 13064.5 |
| dihydropteroate synthase | AJAP_RS38745 | Not Available | - | 8344152 - 8344994 | 28953.5 |
| ydcf family protein | AJAP_RS38750 | Not Available | - | 8344991 - 8345335 | 12504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.