Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | AJAP_RS38655 | Not Available | - | 8326255 - 8328813 | 94791.3 |
| iron-sulfur protein | AJAP_RS38660 | Not Available | + | 8329221 - 8329979 | 27339.5 |
| tigr03086 family metal-binding protein | AJAP_RS38665 | Not Available | - | 8329976 - 8330557 | 20267.9 |
| helix-turn-helix domain-containing protein | AJAP_RS38670 | Not Available | + | 8330624 - 8331463 | 30669.6 |
| histone-like nucleoid-structuring protein lsr2 | AJAP_RS38675 | Not Available | - | 8331470 - 8331823 | 12905.1 |
| lysine--trna ligase | AJAP_RS38680 | Not Available | - | 8331975 - 8333486 | 56066.7 |
| class i sam-dependent methyltransferase | AJAP_RS38685 | Not Available | + | 8333583 - 8334356 | 27908.1 |
| class i sam-dependent methyltransferase | AJAP_RS38690 | Not Available | + | 8334353 - 8335117 | 28030.0 |
| type iii pantothenate kinase | AJAP_RS38695 | Not Available | - | 8335164 - 8335943 | 27342.4 |
| aspartate 1-decarboxylase | AJAP_RS38700 | Not Available | - | 8335948 - 8336442 | 17352.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.