Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sir2 family nad-dependent protein deacylase | AJAP_RS38605 | Not Available | + | 8313610 - 8314422 | 29488.9 |
| hypothetical protein | AJAP_RS38610 | Not Available | - | 8314415 - 8315245 | 28736.3 |
| endonuclease/exonuclease/phosphatase family protein | AJAP_RS38615 | Not Available | - | 8315271 - 8316299 | 36435.0 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | AJAP_RS38620 | Not Available | + | 8316437 - 8317414 | 34733.6 |
| abc transporter permease | AJAP_RS38625 | Not Available | + | 8317411 - 8318211 | 28589.2 |
| btad domain-containing putative transcriptional regulator | AJAP_RS38630 | Not Available | - | 8318277 - 8321462 | 114862.0 |
| m1 family metallopeptidase | AJAP_RS38635 | Not Available | + | 8321614 - 8323029 | 51342.0 |
| pyroglutamyl-peptidase i | AJAP_RS38640 | Not Available | + | 8323056 - 8323691 | 22355.7 |
| hsp70 family protein | AJAP_RS38645 | Not Available | - | 8323692 - 8325446 | 62230.3 |
| xre family transcriptional regulator | AJAP_RS38650 | Not Available | - | 8325508 - 8325846 | 12405.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.