Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AJAP_RS38555 | Not Available | - | 8304671 - 8305651 | 35819.3 |
| purine-cytosine permease family protein | AJAP_RS38560 | Not Available | - | 8305648 - 8306961 | 45790.3 |
| pp_07766 | AJAP_RS38565 | Not Available | - | 8306964 - 8307650 | Not Available |
| lysr family transcriptional regulator | AJAP_RS38570 | Not Available | + | 8307810 - 8308763 | 34654.7 |
| rhodanese-like domain-containing protein | AJAP_RS38575 | Not Available | + | 8308856 - 8309206 | 13105.7 |
| thioredoxin family protein | AJAP_RS38580 | Not Available | + | 8309219 - 8309653 | 15610.1 |
| alpha/beta fold hydrolase | AJAP_RS38585 | Not Available | - | 8309635 - 8310432 | 29535.0 |
| m1 family metallopeptidase | AJAP_RS38590 | Not Available | + | 8310431 - 8311873 | 52498.6 |
| fad-dependent monooxygenase | AJAP_RS38595 | Not Available | - | 8312045 - 8313247 | 43892.3 |
| antibiotic biosynthesis monooxygenase family protein | AJAP_RS38600 | Not Available | + | 8313309 - 8313617 | 11145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.