Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase algx-related protein | AJAP_RS38505 | Not Available | + | 8293678 - 8294991 | 47675.5 |
| metal abc transporter permease | AJAP_RS38510 | Not Available | - | 8294988 - 8295869 | 29952.9 |
| metal abc transporter atp-binding protein | AJAP_RS38515 | Not Available | - | 8296045 - 8296878 | 29882.9 |
| metal abc transporter solute-binding protein, zn/mn family | AJAP_RS38520 | Not Available | - | 8296878 - 8297807 | 31520.0 |
| laci family dna-binding transcriptional regulator | AJAP_RS38525 | Not Available | + | 8298008 - 8299108 | 39153.8 |
| carbonic anhydrase | AJAP_RS38530 | Not Available | + | 8299160 - 8299651 | 18324.0 |
| a/g-specific adenine glycosylase | AJAP_RS38535 | Not Available | + | 8299670 - 8300545 | 31288.3 |
| n-acetylmuramoyl-l-alanine amidase | AJAP_RS38540 | Not Available | + | 8300634 - 8301596 | 34202.3 |
| mfs transporter | AJAP_RS38545 | Not Available | - | 8301541 - 8302695 | 38411.0 |
| m1 family metallopeptidase | AJAP_RS38550 | Not Available | + | 8302862 - 8304301 | 52099.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.