Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ppox class f420-dependent oxidoreductase | AJAP_RS38355 | Not Available | + | 8265244 - 8265639 | 14380.1 |
| ppox class f420-dependent oxidoreductase | AJAP_RS38360 | Not Available | + | 8265654 - 8266049 | 14530.2 |
| had family hydrolase | AJAP_RS38365 | Not Available | + | 8266157 - 8266843 | 25447.1 |
| cysteine--trna ligase | AJAP_RS38370 | Not Available | + | 8266890 - 8268287 | 50978.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | AJAP_RS38375 | Not Available | + | 8268325 - 8269281 | 33706.7 |
| mboat family o-acyltransferase | AJAP_RS38380 | Not Available | + | 8269367 - 8270800 | 53251.7 |
| hypothetical protein | AJAP_RS38385 | Not Available | + | 8270811 - 8271155 | 12371.9 |
| hit family protein | AJAP_RS38390 | Not Available | + | 8271165 - 8271629 | 17442.6 |
| alpha/beta hydrolase | AJAP_RS38395 | Not Available | - | 8271671 - 8272534 | 30996.9 |
| alpha/beta fold hydrolase | AJAP_RS38400 | Not Available | - | 8272670 - 8273389 | 25211.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.