Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | AJAP_RS03585 | Not Available | - | 715967 - 717028 | 37148.0 |
| molybdenum cofactor biosynthesis protein b | AJAP_RS03590 | Not Available | + | 717151 - 717651 | 16716.9 |
| hypothetical protein | AJAP_RS03595 | Not Available | - | 717648 - 717926 | 9327.05 |
| hypothetical protein | AJAP_RS42815 | Not Available | + | 717982 - 718155 | 6562.35 |
| large-conductance mechanosensitive channel protein mscl | AJAP_RS03600 | Not Available | - | 718162 - 718566 | 14330.5 |
| saf domain-containing protein | AJAP_RS03605 | Not Available | - | 718657 - 719298 | 21618.5 |
| fmdb family zinc ribbon protein | AJAP_RS03610 | Not Available | - | 719414 - 719725 | 10793.3 |
| class i sam-dependent methyltransferase | AJAP_RS03615 | Not Available | + | 719902 - 720537 | 22809.7 |
| pyridoxal phosphate-dependent decarboxylase family protein | AJAP_RS03620 | Not Available | + | 720530 - 721927 | 49480.1 |
| voc family protein | AJAP_RS03625 | Not Available | + | 721933 - 722340 | 14819.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.