Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sialidase family protein | AJAP_RS38305 | Not Available | - | 8256215 - 8257267 | 38224.6 |
| glycoside hydrolase family 6 protein | AJAP_RS38310 | Not Available | - | 8257433 - 8258389 | 33044.0 |
| c39 family peptidase | AJAP_RS38315 | Not Available | - | 8258505 - 8259158 | 23495.8 |
| rna polymerase sigma factor | AJAP_RS38320 | Not Available | + | 8259317 - 8259946 | 22623.6 |
| cu044_5270 family protein | AJAP_RS38325 | Not Available | + | 8259957 - 8261054 | 39392.4 |
| dna repair protein rada | AJAP_RS38330 | Not Available | - | 8261051 - 8262409 | 46873.8 |
| hypothetical protein | AJAP_RS38335 | Not Available | - | 8262521 - 8263249 | 23779.9 |
| card family transcriptional regulator | AJAP_RS38340 | Not Available | + | 8263547 - 8264038 | 18070.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AJAP_RS38345 | Not Available | + | 8264098 - 8264748 | 22980.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AJAP_RS38350 | Not Available | + | 8264745 - 8265215 | 15734.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.