Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | AJAP_RS38205 | Not Available | - | 8234282 - 8235556 | 46371.8 |
| ycii family protein | AJAP_RS38210 | Not Available | - | 8235587 - 8236003 | 15586.6 |
| small ribosomal subunit rsm22 family protein | AJAP_RS38215 | Not Available | + | 8236137 - 8237144 | 36167.0 |
| lysr substrate-binding domain-containing protein | AJAP_RS38220 | Not Available | - | 8237126 - 8238037 | 33374.6 |
| gaf and antar domain-containing protein | AJAP_RS38225 | Not Available | - | 8238090 - 8238803 | 26149.7 |
| gaf and antar domain-containing protein | AJAP_RS38230 | Not Available | - | 8238833 - 8239666 | 30073.9 |
| sigma-70 family rna polymerase sigma factor | AJAP_RS38235 | Not Available | - | 8239905 - 8240525 | 22429.1 |
| beta-1,3-glucanase family protein | AJAP_RS38240 | Not Available | + | 8240830 - 8242017 | 42144.6 |
| terpene synthase family protein | AJAP_RS38245 | Not Available | - | 8242022 - 8244163 | 79977.4 |
| duf3800 domain-containing protein | AJAP_RS38250 | Not Available | - | 8244269 - 8245048 | 28531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.