Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| btad domain-containing putative transcriptional regulator | AJAP_RS38060 | Not Available | - | 8206016 - 8208943 | 101894.0 |
| hypothetical protein | AJAP_RS38065 | Not Available | - | 8208943 - 8209362 | 14667.0 |
| pilus assembly protein tadg-related protein | AJAP_RS38070 | Not Available | - | 8209397 - 8209786 | 12955.7 |
| hypothetical protein | AJAP_RS38075 | Not Available | + | 8209877 - 8210401 | 19145.8 |
| tade/tadg family type iv pilus assembly protein | AJAP_RS38080 | Not Available | - | 8210407 - 8210811 | 13766.6 |
| hypothetical protein | AJAP_RS38085 | Not Available | - | 8210874 - 8211809 | 33567.2 |
| tade/tadg family type iv pilus assembly protein | AJAP_RS38090 | Not Available | - | 8211862 - 8212314 | 15837.1 |
| hypothetical protein | AJAP_RS38095 | Not Available | - | 8212317 - 8212514 | 6976.87 |
| type ii secretion system f family protein | AJAP_RS38100 | Not Available | - | 8212566 - 8213459 | 30932.1 |
| type ii secretion system f family protein | AJAP_RS38105 | Not Available | - | 8213456 - 8214385 | 32048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.