Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS37925 | Not Available | + | 8177667 - 8178761 | 38893.1 |
| pilin | AJAP_RS37930 | Not Available | + | 8178971 - 8179294 | 10888.8 |
| hypothetical protein | AJAP_RS37935 | Not Available | + | 8179412 - 8181646 | 77863.6 |
| prgi family protein | AJAP_RS37940 | Not Available | + | 8181660 - 8182913 | 44062.4 |
| virb4 family type iv secretion system protein | AJAP_RS37945 | Not Available | + | 8182920 - 8184890 | 70309.7 |
| type iv secretory system conjugative dna transfer family protein | AJAP_RS37950 | Not Available | + | 8184959 - 8187520 | 92887.2 |
| replication-relaxation family protein | AJAP_RS37955 | Not Available | + | 8187651 - 8188730 | 39272.5 |
| c40 family peptidase | AJAP_RS37960 | Not Available | + | 8188802 - 8189776 | 33439.6 |
| hypothetical protein | AJAP_RS37965 | Not Available | + | 8190100 - 8190693 | 21631.6 |
| hypothetical protein | AJAP_RS37970 | Not Available | + | 8190700 - 8191839 | 41999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.