Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdgsh iron-sulfur domain-containing protein | AJAP_RS37840 | Not Available | - | 8160926 - 8161165 | 8449.06 |
| heavy-metal-associated domain-containing protein | AJAP_RS37845 | Not Available | - | 8161165 - 8161371 | 6799.03 |
| hypothetical protein | AJAP_RS43895 | Not Available | + | 8161652 - 8162206 | 18736.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AJAP_RS37850 | Not Available | + | 8162331 - 8163176 | 31836.9 |
| methyltransferase domain-containing protein | AJAP_RS37855 | Not Available | - | 8163226 - 8164011 | 27824.0 |
| merr family transcriptional regulator | AJAP_RS37860 | Not Available | + | 8164040 - 8164465 | 15423.4 |
| mfs transporter | AJAP_RS37865 | Not Available | - | 8164586 - 8165953 | 46899.9 |
| hypothetical protein | AJAP_RS37870 | Not Available | + | 8166180 - 8166947 | 27898.0 |
| hypothetical protein | AJAP_RS44650 | Not Available | - | 8167426 - 8168811 | 51223.4 |
| site-specific integrase | AJAP_RS37880 | Not Available | - | 8169226 - 8170731 | 55667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.