Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS37740 | Not Available | + | 8143386 - 8143889 | 17886.4 |
| tetr/acrr family transcriptional regulator | AJAP_RS37745 | Not Available | + | 8143899 - 8144468 | 20703.9 |
| plp-dependent cysteine synthase family protein | AJAP_RS37750 | Not Available | + | 8145387 - 8146505 | 39994.2 |
| mfs transporter | AJAP_RS37755 | Not Available | + | 8146502 - 8147758 | 43705.4 |
| duf6153 family protein | AJAP_RS37760 | Not Available | + | 8147808 - 8148218 | 14264.5 |
| duf305 domain-containing protein | AJAP_RS37765 | Not Available | + | 8148279 - 8148929 | 22714.0 |
| hypothetical protein | AJAP_RS37770 | Not Available | + | 8149190 - 8149561 | 13308.9 |
| c40 family peptidase | AJAP_RS37775 | Not Available | + | 8149755 - 8150777 | 35309.4 |
| blai/meci/copy family transcriptional regulator | AJAP_RS37780 | Not Available | + | 8150815 - 8151177 | 14088.9 |
| m56 family metallopeptidase | AJAP_RS37785 | Not Available | + | 8151174 - 8152109 | 32765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.