Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | AJAP_RS37600 | Not Available | + | 8114781 - 8116613 | 61696.4 |
| nuom family protein | AJAP_RS37605 | Not Available | + | 8116631 - 8118112 | 52363.2 |
| nadh-quinone oxidoreductase subunit n | AJAP_RS37610 | Not Available | + | 8118126 - 8119541 | 48799.5 |
| vanw family protein | AJAP_RS37615 | Not Available | + | 8119829 - 8121397 | 55171.7 |
| cytochrome c oxidase subunit i | AJAP_RS37620 | Not Available | + | 8121475 - 8123250 | 65996.9 |
| multicopper oxidase family protein | AJAP_RS37625 | Not Available | + | 8123219 - 8124868 | 58604.9 |
| cytochrome c biogenesis ccda family protein | AJAP_RS37630 | Not Available | - | 8125291 - 8126028 | 25580.6 |
| atp-binding cassette domain-containing protein | AJAP_RS37635 | Not Available | + | 8126094 - 8126783 | 23986.4 |
| heme exporter protein ccmb | AJAP_RS37640 | Not Available | + | 8126780 - 8127448 | 23118.2 |
| cytochrome c biogenesis protein ccsa | AJAP_RS37645 | Not Available | + | 8127445 - 8128176 | 26811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.