Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sagb/thcox family dehydrogenase | AJAP_RS37420 | Not Available | + | 8083329 - 8084504 | 43406.0 |
| mfs transporter | AJAP_RS37425 | Not Available | + | 8084521 - 8085783 | 42678.2 |
| duf2625 family protein | AJAP_RS37430 | Not Available | + | 8085853 - 8086521 | 23804.8 |
| ydcf family protein | AJAP_RS44990 | Not Available | - | 8086626 - 8086742 | 4158.95 |
| arsr/smtb family transcription factor | AJAP_RS37435 | Not Available | - | 8086826 - 8087788 | 34628.4 |
| hypothetical protein | AJAP_RS37440 | Not Available | + | 8087960 - 8088442 | 17317.6 |
| ydcf family protein | AJAP_RS43335 | Not Available | - | 8088488 - 8088805 | 11392.4 |
| hypothetical protein | AJAP_RS44300 | Not Available | + | 8088803 - 8089009 | 7711.94 |
| Trna-pseudo | Not Available | Not Available | + | 8089176 - 8089251 | Not Available |
| shedu immune nuclease family protein | AJAP_RS37450 | Not Available | - | 8089590 - 8090828 | 46300.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.