Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid-oxoacid transhydrogenase | AJAP_RS37275 | Not Available | + | 8047360 - 8048592 | 43501.7 |
| acyl-coa thioesterase | AJAP_RS37280 | Not Available | + | 8048586 - 8049005 | 15777.8 |
| abc transporter atp-binding protein | AJAP_RS37285 | Not Available | - | 8048961 - 8050697 | 60047.5 |
| abc transporter atp-binding protein | AJAP_RS37290 | Not Available | - | 8050694 - 8052361 | 57869.7 |
| sapb/amfs family lanthipeptide | AJAP_RS43890 | Not Available | - | 8052473 - 8052616 | 4623.49 |
| class iii lanthionine synthetase lankc | AJAP_RS37295 | Not Available | - | 8052656 - 8055199 | 93034.7 |
| hypothetical protein | AJAP_RS37300 | Not Available | + | 8055625 - 8055990 | 12528.0 |
| hypothetical protein | AJAP_RS37305 | Not Available | + | 8055983 - 8056405 | 15156.6 |
| mce family protein | AJAP_RS37310 | Not Available | - | 8056421 - 8057407 | 34792.6 |
| ppox class f420-dependent oxidoreductase | AJAP_RS37315 | Not Available | - | 8057514 - 8057897 | 14511.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.