Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS43885 | Not Available | + | 8036261 - 8037733 | 49387.5 |
| glutamate abc transporter substrate-binding protein | AJAP_RS37235 | Not Available | - | 8037777 - 8038742 | 33868.5 |
| hypothetical protein | AJAP_RS37240 | Not Available | - | 8038742 - 8040127 | 47942.2 |
| gaf domain-containing protein | AJAP_RS37245 | Not Available | - | 8040258 - 8041508 | 44632.4 |
| atp-nad kinase | AJAP_RS37250 | Not Available | - | 8041585 - 8042454 | 29627.0 |
| sensor histidine kinase | AJAP_RS37255 | Not Available | + | 8042641 - 8043900 | 44303.6 |
| response regulator | AJAP_RS37260 | Not Available | + | 8043897 - 8044559 | 23398.5 |
| cold-shock protein | AJAP_RS37265 | Not Available | - | 8044630 - 8044833 | 7253.45 |
| hypothetical protein | AJAP_RS44470 | Not Available | - | 8045097 - 8045267 | 5879.81 |
| thiamine pyrophosphate-binding protein | AJAP_RS37270 | Not Available | - | 8045527 - 8047188 | 59153.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.