Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fixh family protein | AJAP_RS37040 | Not Available | + | 8003199 - 8003606 | 14062.1 |
| hypothetical protein | AJAP_RS37045 | Not Available | + | 8003625 - 8004755 | 38946.1 |
| hypothetical protein | AJAP_RS37050 | Not Available | + | 8004748 - 8005296 | 19636.1 |
| duf397 domain-containing protein | AJAP_RS37055 | Not Available | - | 8005354 - 8005608 | 8949.25 |
| hypothetical protein | AJAP_RS37060 | Not Available | + | 8005915 - 8006187 | 9568.57 |
| hypothetical protein | AJAP_RS37065 | Not Available | + | 8006193 - 8006453 | 9848.94 |
| sam-dependent methyltransferase | AJAP_RS37070 | Not Available | - | 8006460 - 8007317 | 31636.3 |
| sam-dependent methyltransferase | AJAP_RS37075 | Not Available | - | 8007332 - 8008147 | 29276.8 |
| helix-turn-helix domain-containing protein | AJAP_RS37080 | Not Available | - | 8008149 - 8009006 | 32138.4 |
| mbl fold metallo-hydrolase | AJAP_RS37085 | Not Available | + | 8009227 - 8010135 | 32491.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.