Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycze/yyas/yitt family protein | AJAP_RS36990 | Not Available | + | 7994549 - 7995181 | 22130.7 |
| clp protease n-terminal domain-containing protein | AJAP_RS36995 | Not Available | - | 7995544 - 7996068 | 18719.3 |
| sigma factor-like helix-turn-helix dna-binding protein | AJAP_RS37000 | Not Available | - | 7996068 - 7996277 | 7716.24 |
| protein phosphatase 2c domain-containing protein | AJAP_RS37005 | Not Available | + | 7996340 - 7997113 | 27180.7 |
| ydcf family protein | AJAP_RS43305 | Not Available | + | 7997248 - 7997718 | 16490.3 |
| d-cysteine desulfhydrase family protein | AJAP_RS37015 | Not Available | - | 7997797 - 7998801 | 34948.5 |
| amidase | AJAP_RS37020 | Not Available | + | 7998878 - 8000260 | 48542.8 |
| tetr/acrr family transcriptional regulator | AJAP_RS37025 | Not Available | + | 8000257 - 8000805 | 19303.4 |
| oxygenase mpab family protein | AJAP_RS37030 | Not Available | + | 8000802 - 8001653 | 32973.8 |
| hypothetical protein | AJAP_RS37035 | Not Available | + | 8001754 - 8003202 | 50112.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.