Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | AJAP_RS36940 | Not Available | + | 7984689 - 7985819 | 41142.2 |
| aaa family atpase | AJAP_RS36945 | Not Available | - | 7985784 - 7986440 | 24427.5 |
| zf-tfiib domain-containing protein | AJAP_RS36950 | Not Available | - | 7986443 - 7986820 | 13482.7 |
| voc family protein | AJAP_RS36955 | Not Available | - | 7986854 - 7987222 | 13380.6 |
| cgnr zinc finger domain-containing protein | AJAP_RS36960 | Not Available | + | 7987316 - 7987783 | 17424.7 |
| duf445 domain-containing protein | AJAP_RS36965 | Not Available | - | 7988088 - 7989386 | 47805.6 |
| pyridoxal phosphate-dependent aminotransferase | AJAP_RS36970 | Not Available | + | 7989416 - 7990579 | 42036.3 |
| rna polymerase sigma factor | AJAP_RS36975 | Not Available | - | 7990592 - 7991065 | 17750.6 |
| hypothetical protein | AJAP_RS36980 | Not Available | + | 7991431 - 7992516 | 35474.3 |
| plp-dependent aminotransferase family protein | AJAP_RS36985 | Not Available | - | 7993033 - 7994487 | 50818.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.