Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | AJAP_RS36890 | Not Available | - | 7976972 - 7977970 | 35211.4 |
| srpbcc family protein | AJAP_RS36895 | Not Available | - | 7978070 - 7978504 | 15460.3 |
| abc transporter substrate-binding protein | AJAP_RS36900 | Not Available | - | 7978654 - 7979574 | 32598.0 |
| abc transporter permease | AJAP_RS36905 | Not Available | + | 7979724 - 7980410 | 24408.6 |
| abc transporter permease | AJAP_RS36910 | Not Available | + | 7980407 - 7981123 | 25766.6 |
| aromatic amino acid lyase | AJAP_RS36915 | Not Available | - | 7981062 - 7982513 | 51046.4 |
| ybak/ebsc family protein | AJAP_RS36920 | Not Available | - | 7982510 - 7983064 | 18917.0 |
| duf2516 family protein | AJAP_RS36925 | Not Available | - | 7983078 - 7983371 | 10804.5 |
| hypothetical protein | AJAP_RS36930 | Not Available | - | 7983456 - 7984127 | 23993.2 |
| helix-turn-helix domain-containing protein | AJAP_RS36935 | Not Available | - | 7984124 - 7984537 | 15024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.