Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS36695 | Not Available | - | 7937754 - 7938128 | 13158.3 |
| hypothetical protein | AJAP_RS36700 | Not Available | - | 7938106 - 7938558 | 16309.7 |
| hypothetical protein | AJAP_RS36705 | Not Available | - | 7938555 - 7939106 | 19794.8 |
| porphobilinogen synthase | AJAP_RS36710 | Not Available | - | 7939117 - 7940088 | 34617.4 |
| nramp family divalent metal transporter | AJAP_RS36715 | Not Available | + | 7940209 - 7941495 | 46554.9 |
| uroporphyrinogen-iii synthase | AJAP_RS36720 | Not Available | - | 7941742 - 7943274 | 53626.9 |
| hydroxymethylbilane synthase | AJAP_RS36725 | Not Available | - | 7943335 - 7944282 | 32582.0 |
| glutamyl-trna reductase | AJAP_RS36730 | Not Available | - | 7944290 - 7945597 | 45898.7 |
| redox-sensing transcriptional repressor rex | AJAP_RS36735 | Not Available | - | 7945599 - 7946426 | 28490.2 |
| molybdopterin-dependent oxidoreductase | AJAP_RS36740 | Not Available | - | 7946605 - 7948140 | 55039.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.