Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | AJAP_RS36600 | Not Available | - | 7919628 - 7921148 | 54315.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AJAP_RS36605 | Not Available | - | 7921257 - 7922933 | 59798.9 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | AJAP_RS36610 | Not Available | + | 7922991 - 7923914 | 34012.7 |
| hypothetical protein | AJAP_RS42635 | Not Available | + | 7924014 - 7924388 | 13497.9 |
| o-succinylbenzoate--coa ligase | AJAP_RS36620 | Not Available | + | 7924421 - 7925545 | 38341.8 |
| hypothetical protein | AJAP_RS44465 | Not Available | + | 7925608 - 7925766 | 5517.62 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | AJAP_RS36625 | Not Available | + | 7925851 - 7926720 | 29638.8 |
| plp-dependent cysteine synthase family protein | AJAP_RS36630 | Not Available | - | 7927090 - 7928172 | 39782.9 |
| duf4229 domain-containing protein | AJAP_RS36635 | Not Available | - | 7928169 - 7928447 | 9916.57 |
| lrp/asnc family transcriptional regulator | AJAP_RS36640 | Not Available | - | 7928459 - 7928932 | 16415.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.