Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c | AJAP_RS36550 | Not Available | - | 7910596 - 7911360 | 28369.9 |
| nuob/complex i 20 kda subunit family protein | AJAP_RS36555 | Not Available | - | 7911366 - 7911914 | 19970.7 |
| nadh-quinone oxidoreductase subunit a | AJAP_RS36560 | Not Available | - | 7911921 - 7912328 | 14578.3 |
| geranylgeranyl reductase family protein | AJAP_RS36565 | Not Available | - | 7912836 - 7914122 | 46097.2 |
| class i sam-dependent methyltransferase | AJAP_RS36570 | Not Available | - | 7914119 - 7914823 | 25639.9 |
| afsr/sarp family transcriptional regulator | AJAP_RS36575 | Not Available | - | 7914892 - 7915662 | 28646.6 |
| glycosyltransferase family 4 protein | AJAP_RS36580 | Not Available | - | 7915742 - 7916845 | 39712.7 |
| glycosyltransferase family 1 protein | AJAP_RS36585 | Not Available | - | 7916850 - 7917968 | 39699.2 |
| inositol monophosphatase | AJAP_RS36590 | Not Available | + | 7918080 - 7918910 | 28667.0 |
| duf3592 domain-containing protein | AJAP_RS36595 | Not Available | - | 7919153 - 7919605 | 16274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.