Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | AJAP_RS36455 | Not Available | - | 7888462 - 7889202 | 27372.0 |
| aaa family atpase | AJAP_RS36460 | Not Available | - | 7889199 - 7890386 | 43097.1 |
| hypothetical protein | AJAP_RS36465 | Not Available | - | 7890413 - 7891405 | 36055.7 |
| hypothetical protein | AJAP_RS36470 | Not Available | + | 7891861 - 7892283 | 14674.0 |
| duf3558 domain-containing protein | AJAP_RS43295 | Not Available | + | 7892283 - 7892900 | 21176.9 |
| ppe domain-containing protein | AJAP_RS36475 | Not Available | + | 7892900 - 7894144 | 41309.4 |
| esx secretion-associated protein espg | AJAP_RS36480 | Not Available | + | 7894172 - 7894924 | 27522.4 |
| helix-turn-helix domain-containing protein | AJAP_RS36485 | Not Available | - | 7894877 - 7895653 | 28184.1 |
| alpha/beta fold hydrolase | AJAP_RS36490 | Not Available | - | 7895686 - 7896471 | 28403.8 |
| nadh-quinone oxidoreductase subunit nuon | AJAP_RS36495 | Not Available | - | 7896569 - 7898134 | 54528.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.