Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase dnda | AJAP_RS03400 | Not Available | - | 676309 - 677460 | 41590.1 |
| dna sulfur modification protein dndb | AJAP_RS03405 | Not Available | + | 677620 - 678774 | 43473.2 |
| dna phosphorothioation system sulfurtransferase dndc | AJAP_RS03410 | Not Available | + | 678771 - 680318 | 59153.0 |
| dna sulfur modification protein dndd | AJAP_RS03415 | Not Available | + | 680315 - 682291 | 73615.4 |
| dna sulfur modification protein dnde | AJAP_RS03420 | Not Available | + | 682307 - 682696 | 14783.7 |
| dna phosphorothioation-associated putative methyltransferase | AJAP_RS45290 | Not Available | + | 682693 - 683196 | 18111.5 |
| ydcf family protein | AJAP_RS45295 | Not Available | + | 683192 - 683977 | 29550.2 |
| ydcf family protein | AJAP_RS03425 | Not Available | - | 684045 - 685336 | 45324.1 |
| dna phosphorothioation-associated protein 4 | AJAP_RS42395 | Not Available | - | 685675 - 686142 | 16970.0 |
| aaa family atpase | AJAP_RS03435 | Not Available | - | 686139 - 688199 | 77516.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.