Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii family protein | AJAP_RS36355 | Not Available | - | 7864125 - 7866071 | 71213.3 |
| bi-domain-containing oxidoreductase | AJAP_RS36360 | Not Available | - | 7866071 - 7868251 | 77424.3 |
| asparagine synthase (glutamine-hydrolyzing) | AJAP_RS36365 | Not Available | - | 7868267 - 7870162 | 69953.8 |
| wzz/fepe/etk n-terminal domain-containing protein | AJAP_RS36370 | Not Available | - | 7870178 - 7871776 | 57414.2 |
| exopolysaccharide biosynthesis protein | AJAP_RS36375 | Not Available | - | 7871773 - 7873053 | 44565.2 |
| glycosyltransferase family 4 protein | AJAP_RS36380 | Not Available | - | 7873193 - 7874380 | 43788.5 |
| nucleotide sugar dehydrogenase | AJAP_RS36385 | Not Available | - | 7874361 - 7875677 | 46568.1 |
| hypothetical protein | AJAP_RS36390 | Not Available | + | 7876039 - 7877040 | 36637.8 |
| glycoside hydrolase family 75 protein | AJAP_RS36395 | Not Available | - | 7877105 - 7877770 | 22972.1 |
| polysaccharide deacetylase family protein | AJAP_RS36400 | Not Available | - | 7877877 - 7878533 | 24524.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.