Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein | AJAP_RS36305 | Not Available | + | 7852473 - 7853660 | 42671.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | AJAP_RS36310 | Not Available | + | 7853657 - 7854205 | 20093.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | AJAP_RS36315 | Not Available | + | 7854210 - 7855526 | 47121.1 |
| right-handed parallel beta-helix repeat-containing protein | AJAP_RS36320 | Not Available | + | 7855523 - 7857022 | 53831.4 |
| right-handed parallel beta-helix repeat-containing protein | AJAP_RS36325 | Not Available | + | 7857079 - 7858515 | 51230.3 |
| hypothetical protein | AJAP_RS44560 | Not Available | + | 7858960 - 7859601 | 23928.6 |
| phosphatase pap2 family protein | AJAP_RS36335 | Not Available | - | 7859585 - 7860220 | 21753.1 |
| glycosyltransferase family 4 protein | AJAP_RS36340 | Not Available | - | 7860217 - 7861398 | 42800.5 |
| o-antigen ligase | AJAP_RS36345 | Not Available | - | 7861395 - 7862603 | 43009.6 |
| right-handed parallel beta-helix repeat-containing protein | AJAP_RS36350 | Not Available | - | 7862605 - 7864128 | 54623.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.