Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| btrh n-terminal domain-containing protein | AJAP_RS36255 | Not Available | + | 7841126 - 7842313 | 42542.1 |
| acyl-coa thioesterase | AJAP_RS36260 | Not Available | + | 7842377 - 7842838 | 17484.0 |
| s8 family serine peptidase | AJAP_RS36265 | Not Available | + | 7842974 - 7844899 | 67895.2 |
| class i sam-dependent methyltransferase | AJAP_RS36270 | Not Available | + | 7845277 - 7846512 | 45564.2 |
| sugar phosphate nucleotidyltransferase | AJAP_RS36275 | Not Available | + | 7846509 - 7847300 | 29683.4 |
| pig-l deacetylase family protein | AJAP_RS36280 | Not Available | + | 7847297 - 7847950 | 23864.6 |
| nad-dependent epimerase/dehydratase family protein | AJAP_RS36285 | Not Available | + | 7847956 - 7848978 | 36651.3 |
| duf4910 domain-containing protein | AJAP_RS36290 | Not Available | + | 7848978 - 7850252 | 46996.3 |
| membrane protein | AJAP_RS36295 | Not Available | + | 7850255 - 7851529 | 44006.9 |
| glycosyltransferase family 2 protein | AJAP_RS36300 | Not Available | + | 7851526 - 7852476 | 35798.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.