Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AJAP_RS36205 | Not Available | - | 7832262 - 7832834 | 20383.4 |
| Trna-tyr | Not Available | Not Available | + | 7832928 - 7833009 | Not Available |
| yajq family cyclic di-gmp-binding protein | AJAP_RS36215 | Not Available | + | 7833129 - 7833620 | 18002.5 |
| hypothetical protein | AJAP_RS36220 | Not Available | - | 7833670 - 7834344 | 23149.5 |
| sialidase family protein | AJAP_RS36225 | Not Available | + | 7834529 - 7835677 | 42391.3 |
| glucose-1-phosphate thymidylyltransferase rfba | AJAP_RS36230 | Not Available | + | 7835731 - 7836612 | 31816.2 |
| ntaa/dmoa family fmn-dependent monooxygenase | AJAP_RS36235 | Not Available | - | 7836602 - 7837918 | 48796.1 |
| llm class flavin-dependent oxidoreductase | AJAP_RS36240 | Not Available | - | 7837922 - 7838992 | 37930.7 |
| zinc metalloprotease htpx | AJAP_RS36245 | Not Available | - | 7839133 - 7839999 | 30721.8 |
| ynce family protein | AJAP_RS36250 | Not Available | + | 7840133 - 7841101 | 32599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.