Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | AJAP_RS36115 | Not Available | + | 7815599 - 7816447 | 31909.8 |
| pqq-binding-like beta-propeller repeat protein | AJAP_RS36120 | Not Available | - | 7816520 - 7817887 | 48155.2 |
| endopeptidase la | AJAP_RS36125 | Not Available | + | 7818028 - 7820430 | 85628.1 |
| hypothetical protein | AJAP_RS43280 | Not Available | + | 7820597 - 7820797 | 6789.5 |
| helix-turn-helix transcriptional regulator | AJAP_RS36130 | Not Available | + | 7820815 - 7821297 | 17782.5 |
| alkaline phosphatase phox | AJAP_RS36135 | Not Available | + | 7821294 - 7822454 | 40158.4 |
| deda family protein | AJAP_RS36140 | Not Available | - | 7822501 - 7823151 | 23709.3 |
| sensor histidine kinase | AJAP_RS36145 | Not Available | + | 7823305 - 7824438 | 40560.2 |
| response regulator | AJAP_RS36150 | Not Available | + | 7824429 - 7825073 | 23587.5 |
| arsr/smtb family transcription factor | AJAP_RS36155 | Not Available | + | 7825117 - 7825407 | 11033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.