Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr03619 family f420-dependent llm class oxidoreductase | AJAP_RS36065 | Not Available | + | 7808047 - 7808943 | 31847.3 |
| hypothetical protein | AJAP_RS36070 | Not Available | - | 7808981 - 7809196 | 7796.39 |
| sgnh/gdsl hydrolase family protein | AJAP_RS36075 | Not Available | + | 7809316 - 7810248 | 32040.8 |
| maoc family dehydratase | AJAP_RS36080 | Not Available | - | 7810322 - 7810726 | 14475.3 |
| maoc family dehydratase n-terminal domain-containing protein | AJAP_RS36085 | Not Available | - | 7810723 - 7811172 | 16125.9 |
| 50s ribosomal protein l33 | AJAP_RS36090 | Not Available | - | 7811261 - 7811425 | 6442.81 |
| Trna-met | Not Available | Not Available | + | 7811471 - 7811543 | Not Available |
| Trna-thr | Not Available | Not Available | + | 7811593 - 7811665 | Not Available |
| putative bifunctional diguanylate cyclase/phosphodiesterase | AJAP_RS36105 | Not Available | - | 7811745 - 7814360 | 94358.3 |
| gnat family n-acetyltransferase | AJAP_RS36110 | Not Available | + | 7814641 - 7815579 | 33366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.