Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | AJAP_RS36015 | Not Available | - | 7800653 - 7801039 | 13350.0 |
| 50s ribosomal protein l10 | AJAP_RS36020 | Not Available | - | 7801088 - 7801639 | 19086.6 |
| hypothetical protein | AJAP_RS36025 | Not Available | + | 7801969 - 7802814 | 30740.6 |
| alpha/beta fold hydrolase | AJAP_RS36030 | Not Available | - | 7802979 - 7803743 | 26030.1 |
| 50s ribosomal protein l1 | AJAP_RS36035 | Not Available | - | 7803821 - 7804534 | 25386.8 |
| 50s ribosomal protein l11 | AJAP_RS36040 | Not Available | - | 7804616 - 7805050 | 15354.7 |
| transcription termination/antitermination protein nusg | AJAP_RS36045 | Not Available | - | 7805129 - 7805983 | 30340.8 |
| preprotein translocase subunit sece | AJAP_RS36050 | Not Available | - | 7806062 - 7806514 | 16394.7 |
| Trna-trp | Not Available | Not Available | + | 7806542 - 7806614 | Not Available |
| pyridoxal phosphate-dependent aminotransferase | AJAP_RS36060 | Not Available | + | 7806821 - 7808050 | 43154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.