Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | AJAP_RS35675 | Not Available | + | 7738773 - 7739954 | 41344.2 |
| hypothetical protein | AJAP_RS35680 | Not Available | + | 7739951 - 7740673 | 25697.4 |
| endonuclease domain-containing protein | AJAP_RS35685 | Not Available | + | 7740917 - 7741876 | 36224.6 |
| trna pseudouridine(38-40) synthase trua | AJAP_RS35690 | Not Available | - | 7741846 - 7742679 | 30169.8 |
| 50s ribosomal protein l17 | AJAP_RS35695 | Not Available | - | 7742753 - 7743316 | 20025.7 |
| dna-directed rna polymerase subunit alpha | AJAP_RS35700 | Not Available | - | 7743391 - 7744464 | 38431.4 |
| 30s ribosomal protein s4 | AJAP_RS35705 | Not Available | - | 7744592 - 7745197 | 23237.2 |
| 30s ribosomal protein s11 | AJAP_RS35710 | Not Available | - | 7745221 - 7745628 | 14355.3 |
| hypothetical protein | AJAP_RS35715 | Not Available | - | 7745647 - 7745832 | 6593.07 |
| 30s ribosomal protein s13 | AJAP_RS35720 | Not Available | - | 7745829 - 7746209 | 14379.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.