Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fatty acyl-amp ligase | AJAP_RS35570 | Not Available | - | 7713623 - 7715320 | 61559.7 |
| cytochrome p450 | AJAP_RS35575 | Not Available | + | 7715336 - 7716268 | 33146.0 |
| hypothetical protein | AJAP_RS35580 | Not Available | - | 7716273 - 7716752 | 17435.8 |
| hypothetical protein | AJAP_RS35585 | Not Available | - | 7716764 - 7719205 | 83795.7 |
| type vii secretion target | AJAP_RS35590 | Not Available | - | 7719205 - 7719513 | 10837.7 |
| phosphoglucosamine mutase | AJAP_RS35595 | Not Available | - | 7719598 - 7720932 | 45233.1 |
| 30s ribosomal protein s9 | AJAP_RS35600 | Not Available | - | 7721190 - 7721687 | 17723.1 |
| 50s ribosomal protein l13 | AJAP_RS35605 | Not Available | - | 7721702 - 7722154 | 16594.2 |
| hypothetical protein | AJAP_RS35610 | Not Available | + | 7722431 - 7723321 | 32209.5 |
| duf4333 domain-containing protein | AJAP_RS35615 | Not Available | + | 7723325 - 7724062 | 25875.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.