Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AJAP_RS35075 | Not Available | - | 7609786 - 7610367 | 20625.2 |
| spermidine synthase | AJAP_RS35080 | Not Available | - | 7610349 - 7610993 | 23388.0 |
| trmh family rna methyltransferase | AJAP_RS35085 | Not Available | - | 7611016 - 7611534 | 18397.6 |
| duf1918 domain-containing protein | AJAP_RS35090 | Not Available | + | 7611637 - 7611825 | 6709.81 |
| mfs transporter | AJAP_RS35095 | Not Available | - | 7611829 - 7612998 | 38958.6 |
| arsr/smtb family transcription factor | AJAP_RS35100 | Not Available | + | 7613175 - 7613489 | 11526.9 |
| mfs transporter | AJAP_RS35105 | Not Available | + | 7613684 - 7614856 | 39435.6 |
| duf3017 domain-containing protein | AJAP_RS35110 | Not Available | - | 7614861 - 7615160 | 10375.3 |
| glycohydrolase toxin tnt-related protein | AJAP_RS35115 | Not Available | + | 7615279 - 7617945 | 96385.9 |
| pentapeptide repeat-containing protein | AJAP_RS35120 | Not Available | - | 7618018 - 7618605 | 21177.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.