Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis japonica str. MG417-CF17 (=DSM 44213)
Accession NumberNZ_CP008953.1
Gene Summary
Adenine Count
1391836 bp
Thymine Count
1395851 bp
Guanine Count
3084848 bp
Cytosine Count
3088783 bp
Genome Length
8961318 bp
Protein-coding Genes
8377 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lmbu family transcriptional regulator | AJAP_RS34975 | Not Available | + | 7591659 - 7592285 | 24211.7 |
| sdr family nad(p)-dependent oxidoreductase | AJAP_RS34980 | Not Available | + | 7592517 - 7593263 | 25565.6 |
| dha2 family efflux mfs transporter permease subunit | AJAP_RS34985 | Not Available | - | 7593334 - 7594827 | 52484.1 |
| rrf2 family transcriptional regulator | AJAP_RS34990 | Not Available | - | 7595346 - 7595807 | 16592.9 |
| 3-deoxy-7-phosphoheptulonate synthase | AJAP_RS34995 | Not Available | + | 7596132 - 7597277 | 41794.2 |
| salicylate synthase | AJAP_RS35000 | Not Available | + | 7597344 - 7598690 | 48532.3 |
| ketoacyl-acp synthase iii family protein | AJAP_RS35005 | Not Available | + | 7598687 - 7599730 | 36749.4 |
| (2,3-dihydroxybenzoyl)adenylate synthase | AJAP_RS35010 | Not Available | + | 7599732 - 7601360 | 58417.1 |
| phosphopantetheine-binding protein | AJAP_RS35015 | Not Available | + | 7601362 - 7601619 | 9452.34 |
| cupin domain-containing protein | AJAP_RS44635 | Not Available | + | 7601616 - 7602032 | 14894.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.